PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020691278.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 307aa MW: 33598.4 Da PI: 4.7864 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.3 | 1.1e-31 | 116 | 174 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp +++itY+g+Hnh+ XP_020691278.1 116 ADMWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSRTDPAMFVITYTGDHNHS 174 69*************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MFAMEKNDDG WDLFAVVRSC RAASQPPPPP LPTAKPAEAP STSFYNEVEE FCKPFFSMVQ 60 QPKPKPSTLS CSSSLAGAAA RAAPRRPVSQ TKYRSKKRWN QQKRVVCEVP ADGLAADMWA 120 WRKYGQKPIK GSPYPRGYYR CSSSKGCLAR KQVERSRTDP AMFVITYTGD HNHSLPTHRN 180 SLAGSTRQKF SSAASVGEEG SRTVCLPSTP LKREESGEEE EEEEEEDDDD EGILLVEDME 240 VVAEDEVLFM GLEKLQDSPV AAAVTTGAVS EFFGGESCCF EDSFFLHSWS EESSSSGATA 300 AAGGCNT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 5e-50 | WRKY family protein |