PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020691278.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 307aa    MW: 33598.4 Da    PI: 4.7864
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020691278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.31.1e-31116174259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp +++itY+g+Hnh+
  XP_020691278.1 116 ADMWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSRTDPAMFVITYTGDHNHS 174
                     69*************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MFAMEKNDDG WDLFAVVRSC RAASQPPPPP LPTAKPAEAP STSFYNEVEE FCKPFFSMVQ  60
QPKPKPSTLS CSSSLAGAAA RAAPRRPVSQ TKYRSKKRWN QQKRVVCEVP ADGLAADMWA  120
WRKYGQKPIK GSPYPRGYYR CSSSKGCLAR KQVERSRTDP AMFVITYTGD HNHSLPTHRN  180
SLAGSTRQKF SSAASVGEEG SRTVCLPSTP LKREESGEEE EEEEEEDDDD EGILLVEDME  240
VVAEDEVLFM GLEKLQDSPV AAAVTTGAVS EFFGGESCCF EDSFFLHSWS EESSSSGATA  300
AAGGCNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.15e-50WRKY family protein