PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020690931.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GATA | ||||||||
Protein Properties | Length: 140aa MW: 15307.4 Da PI: 10.1192 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 65.2 | 7.1e-21 | 34 | 68 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ CgttkTplWR gp+g+k+LCnaCG++yrkk++ XP_020690931.1 34 CTDCGTTKTPLWRGGPSGPKSLCNACGIRYRKKRR 68 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MDLSGEKATG STDPSADTSN RDCEVSIFDG SKSCTDCGTT KTPLWRGGPS GPKSLCNACG 60 IRYRKKRRAA IGSTKERSED TRNNSSSKKM SSLKMRMMGF GREIIWKPGS LVRNQKNRRL 120 GEEEEAAILL MAISSGFIYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 1e-27 | GATA family protein |