PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020690812.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 180aa MW: 19967.2 Da PI: 9.4225 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.1 | 2e-10 | 23 | 71 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +E++RR +++s +++L +llP + ++ l e L + v YIk+Lq XP_020690812.1 23 RKTIEKKRRMHMKSLYARLNSLLPCS--KKGVSLPLPELLDESVSYIKDLQ 71 678**********************6..38888*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MKSAYTFFQL NMVANAGSAR PDRKTIEKKR RMHMKSLYAR LNSLLPCSKK GVSLPLPELL 60 DESVSYIKDL QKKLEQMKET KSQLAGGMGS EISTITPHLD LREVDGRVGV AIITDARDLS 120 VFCKVVEVIE EEGGEILSAN VTIVGNKAFY IIHSLVEEGN SGSETIRVSE KLRNRVKSIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 4e-20 | bHLH family protein |