PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020690181.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB_related | ||||||||
Protein Properties | Length: 95aa MW: 10922.2 Da PI: 8.8593 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.8 | 6.7e-10 | 9 | 53 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT+ +l+ +a + + ++ +W +ar +g g+t++++k+++ XP_020690181.1 9 TWTQKQNKLFERALAVYDKDtpdRWQNVARAVG-GKTAEEVKLHYE 53 7********************************.**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence |
MASRNSSSTW TQKQNKLFER ALAVYDKDTP DRWQNVARAV GGKTAEEVKL HYELLVEDLK 60 YIESGHFPAP DYKSSGARNT VTEEESRSLR YLKLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 2e-37 | MYB_related family protein |