PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689613.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 383aa    MW: 41865.1 Da    PI: 6.1237
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-09218265455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++ Lq
  XP_020689613.1 218 SHSLAERVRREKISQRMKLLQDLVPGC----NKITGKALMLDEIINYVQALQ 265
                     8**************************....999****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MNCGTPSPDQ LRPALGLSSF NWNQSMDSLS PIFPLPASGE ISSFMGNPLN SMHVNRLMQF  60
PADPGFAERA ARYSCFSSAN YGAFSGVSEA AGKPSRVSSG HCLKAKESRM QLEMGDGEFG  120
SGKEDSSVTD PASVLGESSA KKRKAAAKRK LKVTVENDLI AKKSRSAEST EIEKDSGMPK  180
EEQNVDEKKQ GKDDGTKASE PFKDYIHVRA RRGQATDSHS LAERVRREKI SQRMKLLQDL  240
VPGCNKITGK ALMLDEIINY VQALQRQVEF LSMKLATVNP GLEFNLENLF AKESNEESPI  300
PFTLANGIDT HCSIGQLDSI LHQAALMQSS LDMFGSSASQ VENLWDDELN TVLQSSFGQN  360
QEIGAPSQSF HGQLSIPHMK IEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.14e-62bHLH family protein