PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020689221.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | C2H2 | ||||||||
Protein Properties | Length: 118aa MW: 13421.4 Da PI: 7.5864 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.4 | 0.00011 | 9 | 29 | 1 | 21 |
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 +kC+ Cg+sF + L H XP_020689221.1 9 FKCKTCGRSFATYQALGGHRT 29 89*********9998877765 PP | |||||||
2 | zf-C2H2 | 14.4 | 0.00011 | 49 | 71 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg Fs L H+r+H XP_020689221.1 49 HQCSVCGLNFSMGQALGGHMRRH 71 79********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence |
MEKRRDHEFK CKTCGRSFAT YQALGGHRTG HTRPKEREEK TTKIKERVHQ CSVCGLNFSM 60 GQALGGHMRR HKLLDLLAAP MFVPVLNFDL NVIPMDGDDD GDHYDEVDLP ELTLKLGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 1e-17 | C2H2 family protein |