PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020686819.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 436aa MW: 48363.1 Da PI: 9.1654

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020686819.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20	1.4e-06	181	243	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e +r rr NRe+Ar +R++a + L++kv L+ N+ +k e +++ke+ l++++ XP_020686819.1 181 EREARRMRRVLANRESARQTIRRRQALRDGLTKKVSDLSLDNQNMKMEKGQITKEYMLLRNKN 243 7999****************************************************9998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MSSTCELCLG ILAPSMEGRR IGRIRFEDHR MVGAEVHGNP NGVSNGRHAL TSSSSRSSSS 60 SSSSCLSLSP VSENGGECGL DGMELEAARA LACIARTAVR ECGGRRLKRF KNRSQVRDWE 120 NCNQDWNLDS VPEDNKTINV TMEKKIKLEQ ISEMLPPSSN CSANSVSCSG SKTRLNLTEA 180 EREARRMRRV LANRESARQT IRRRQALRDG LTKKVSDLSL DNQNMKMEKG QITKEYMLLR 240 NKNKQLKKQL AMAIACNIMS AESTSPPPFI PVICPPWPVI AAHPRPCYDE NGFHKASESQ 300 TTPSSCFCSL LDQISVAHHS ISGKWKAKET DFEEKPAIQE QNPRDNSATP ALAPLKDETM 360 KVHKSHKLDI DLNSRSVMPE PSLDAEHSSV SDEPVRVFAE KSVKFVDASA ASSARRRRKE 420 ILKLKHLCGS PIVLHM

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MSSTCELCLG ILAPSMEGRR IGRIRFEDHR MVGAEVHGNP NGVSNGRHAL TSSSSRSSSS  60
SSSSCLSLSP VSENGGECGL DGMELEAARA LACIARTAVR ECGGRRLKRF KNRSQVRDWE  120
NCNQDWNLDS VPEDNKTINV TMEKKIKLEQ ISEMLPPSSN CSANSVSCSG SKTRLNLTEA  180
EREARRMRRV LANRESARQT IRRRQALRDG LTKKVSDLSL DNQNMKMEKG QITKEYMLLR  240
NKNKQLKKQL AMAIACNIMS AESTSPPPFI PVICPPWPVI AAHPRPCYDE NGFHKASESQ  300
TTPSSCFCSL LDQISVAHHS ISGKWKAKET DFEEKPAIQE QNPRDNSATP ALAPLKDETM  360
KVHKSHKLDI DLNSRSVMPE PSLDAEHSSV SDEPVRVFAE KSVKFVDASA ASSARRRRKE  420
ILKLKHLCGS PIVLHM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	147	RRLKRFKNRSQVRDWENCNQDWNLDSVPEDNKTINVTMEKKIK
2	415	420	RRRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	3e-07	bZIP family protein