PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020686734.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YB | ||||||||
Protein Properties | Length: 140aa MW: 15851.8 Da PI: 4.329 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 67.5 | 2.6e-21 | 3 | 75 | 15 | 87 |
NF-YB 15 rimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvyl 87 +i+k++lP + ++++d+++++ ec +efi +v+sea+d c+re+++ti+++ +l al lGf +y+e++ + XP_020686734.1 3 KIIKEMLPPDVRVARDTQDLLVECCVEFINLVSSEANDVCNREDKRTIAPEHVLKALEVLGFGEYIEEVAAAY 75 89*****************************************************************997654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MFKIIKEMLP PDVRVARDTQ DLLVECCVEF INLVSSEAND VCNREDKRTI APEHVLKALE 60 VLGFGEYIEE VAAAYEQHKL ETLDSPKGVR FSGIEMTEEE AAAEQQRMFA EARARMNNGV 120 APQKEPEPDR SFDSQNVDHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23090.4 | 5e-55 | NF-YB family protein |