PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020686678.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 230aa    MW: 25856.2 Da    PI: 7.3722
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020686678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.95.9e-18156190135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  XP_020686678.1 156 CTHCLSQKTPQWRAGPLGPKTLCNACGVRFKSGRL 190
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDSFSNASVS ACLQKSYHSE ISPNEPEQEE NDDVSLEWLS IFMEDCLSGN TTFSIPQNQT  60
PSTNPPPPPT LKLKSSSSSS NDMKFSTKTK TKRRKLTLFE EENTPLLPQA YWLAESELLL  120
PKKDFDENPK AKTIEEEVGA QEQVGKDQGQ VQPRKCTHCL SQKTPQWRAG PLGPKTLCNA  180
CGVRFKSGRL LPEYRPAKSP TFVSYKHSNS HKKVMEMRMA IPSNQFGLED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.15e-37GATA family protein