PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020686613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | FAR1 | ||||||||
Protein Properties | Length: 159aa MW: 18660 Da PI: 7.5405 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 61.8 | 2.1e-19 | 71 | 156 | 2 | 88 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Y++Y+k++GFsvrk+++++ +++ + ++++f Csk +++ + + +++ +++ trtgC +++ + ++ g w+v+k+ ++HnHe XP_020686613.1 71 AYCNYGKNLGFSVRKDHHSYWSNSINLKSNNFICSKADFKKLPDLN-IQRKYRKSDTRTGCPSMIRFTVDEAGYWKVKKFIENHNHE 156 59*****************************************999.88899999*******************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MKMKIDQDLE EDVCFYEQTI FLQGSKEADN LKNADVLETS AHKAEHLKLV RLDEKFSLSD 60 VYVNEKEAYE AYCNYGKNLG FSVRKDHHSY WSNSINLKSN NFICSKADFK KLPDLNIQRK 120 YRKSDTRTGC PSMIRFTVDE AGYWKVKKFI ENHNHESQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 1e-10 | FAR1 family protein |