PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020686105.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 233aa MW: 25626.5 Da PI: 7.366 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.5 | 6.7e-10 | 69 | 117 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++ rE+ RRdr+N++f eL ++l + + +K +Ka iL A + + +L XP_020686105.1 69 KSKACREKMRRDRLNERFLELSSILDPG---KLPKSDKAGILSDAARVLAQL 117 56789**********************9...9**************999888 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 233 aa Download sequence |
MEPNTIPDYW IDDAGGGSDC ELRCALESFC DVPPPASGSG VKEVHRNGCG LEQIGSWKRL 60 RDEACCGSKS KACREKMRRD RLNERFLELS SILDPGKLPK SDKAGILSDA ARVLAQLKSE 120 AEQLKEANKK LQETIKQLKV EKNELRDDKL GLKLEKEKLE LQVKTTGTPT AGLMPPTIAV 180 HPASGPAIYK AHGEAPAKEV APLNAFPCLA MWQWLPPAFL DTTHDPKLWP PHA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G54680.1 | 6e-47 | bHLH family protein |