PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020685032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YB | ||||||||
Protein Properties | Length: 183aa MW: 20147 Da PI: 8.5858 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 129.5 | 1.1e-40 | 25 | 122 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlG.fedyveplkvylkkyrele 94 vre dr+lPia +srimkk+l ++ki+kdaket+qecv efisf+t+ea dkc rekrk i+ dd+l a++tl fedy++p ++y +ky+e+e XP_020685032.1 25 VRELDRLLPIAFISRIMKKALRPKGKIAKDAKETMQECVFEFISFITCEARDKCLREKRKKITEDDVLCAMTTLDrFEDYIKPHRLYSQKYKEIE 119 5899**********************************************************************66******************* PP NF-YB 95 gek 97 g+ XP_020685032.1 120 GDG 122 996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MAAEVPASPC GGSHESGDQS PRSNVRELDR LLPIAFISRI MKKALRPKGK IAKDAKETMQ 60 ECVFEFISFI TCEARDKCLR EKRKKITEDD VLCAMTTLDR FEDYIKPHRL YSQKYKEIEG 120 DGKGSAKGAE SSGKRDAGGL QGGNLSGSSM QGDMKMLQQG SFTEGMNYMN TQVGQMTKAS 180 NCA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53340.1 | 2e-45 | NF-YB family protein |