PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020684346.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 172aa MW: 19136.1 Da PI: 5.3255 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.4 | 1.1e-07 | 70 | 111 | 9 | 55 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r RR++i ++ +eL +l+P +K+s a++L A +Y++ Lq XP_020684346.1 70 ARERRKKISTKTQELGRLIPGG-----EKMSTADMLVAAHKYVRFLQ 111 699*****************96.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MALSFLSQFF EFDSEVTDAV MGLLMPECSS IHSVDFVFSS PPPPPPPPPL SWPESGETVR 60 QIVSPQSVAA RERRKKISTK TQELGRLIPG GEKMSTADML VAAHKYVRFL QAEESVLQYM 120 NEQKVRKGEG EELLQVLLAS PKIQERLSSE GKCLVPKEMV DDLVAKHLIV NN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30670.1 | 1e-28 | bHLH family protein |