PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020683310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 174aa MW: 19855.1 Da PI: 8.8422 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 22.6 | 1.9e-07 | 10 | 58 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + +E+ RR +++ +L l+P+ +++ s + L +A YI++L XP_020683310.1 10 RKTVEKLRRMQMKALCLKLANLIPQdY--LSKENTSQQDHLDRAAAYIHNL 58 5789*********************55..45555**************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MKGGEGKMDR KTVEKLRRMQ MKALCLKLAN LIPQDYLSKE NTSQQDHLDR AAAYIHNLTQ 60 RIQKLKHRKE LGICNYMESD TEIEDSTKLE FKFPVVEVRH QDQNLEVLLI TGLKKKFALH 120 EVIGILEEGG ADVVNASFSI VGNKIIHTIH CQAISSRIGL EASRVSEMLQ QLMR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 5e-23 | bHLH family protein |