PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020682851.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 383aa MW: 43886.9 Da PI: 9.4827 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.3 | 1.8e-15 | 18 | 108 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk+ +l+s +++p f ++ +g + l+ +s W v l kk+++ ++++GW+ F+ ++ L +gDf++F+++g+s+f v+ XP_020682851.1 18 FFKIY--LPNLSSTHMRIPPAFHRHVEGR--APARFYLKGPSEFIWGVDL--VKKPDGLFFSDGWETFALDHALAAGDFLLFEYNGNSTF--SVM 104 67777..566777779*******888777..4557***************..**********************************9999..999 PP EE-S CS B3 96 vfrk 99 +f++ XP_020682851.1 105 IFDN 108 9986 PP | |||||||
2 | B3 | 48.1 | 2.1e-15 | 259 | 349 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f v++ s+v + l lp +f +h +++ +l l d++ ++W v++i++k++ l++GW +F+ n+L++ D++vF+l++ +++++ XP_020682851.1 259 FMMVMKGSYVYNGFYLALPGPFPFKHlpDYN----GELFLHDPNKQQWAVRYIFSKRP---ALSGGWGKFAVGNNLESDDVCVFELIK--KKHMK 344 5667888999************989955433....37***************998888...7***********************997..56679 PP EEEE- CS B3 94 vkvfr 98 v++fr XP_020682851.1 345 VHIFR 349 99998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 383 aa Download sequence |
MPKSNSPPES TPRRSYHFFK IYLPNLSSTH MRIPPAFHRH VEGRAPARFY LKGPSEFIWG 60 VDLVKKPDGL FFSDGWETFA LDHALAAGDF LLFEYNGNST FSVMIFDNTA CEKEVAFFAR 120 PTCDEKVSFS FDERVKEEKK DNSYVGTNQP VKKRTRTLPG TNNECSEVFM ARMWSMQRQA 180 AQALISGRLD HSRDSSNLFN NAIECPSDAN LVLSDNRAND ASRKKRYRGF VSQRRPVTQK 240 ERDDALAKAQ SFKSENPCFM MVMKGSYVYN GFYLALPGPF PFKHLPDYNG ELFLHDPNKQ 300 QWAVRYIFSK RPALSGGWGK FAVGNNLESD DVCVFELIKK KHMKVHIFRV LEDIKPLLRP 360 GRVKDLVANA EANENFKALI DYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18990.1 | 6e-33 | B3 family protein |