PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020682199.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 311aa MW: 34367.2 Da PI: 5.5151

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020682199.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.8	3.6e-16	228	284	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L eN++L k+l ++++ + XP_020682199.2 228 DAKRFRRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSTLMKRLTDVNQKYNEA 284 679********************************************9999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MDRDFSVEEM SGPFWPPSPV GINRSPSEWE FEKFLEEVAV QKTSSTSVPI DPSPDSYQRP 60 HPNRDPKSSP ICNESASSFG SSSVRKGEGR VARGEDEVVE IKGSRPSVAA QSLQSDPSAN 120 PDPEEYAAYL KQKLDMYCAA VAKSRGSGIM LQDSSLADNM PHLSDSLPVG SEALVKGIGT 180 VVVPAMPLKQ NSGFSQARTG TSGSSREQSD DDEFDGEAET AENMDPSDAK RFRRMLSNRE 240 SARRSRRRKQ AHLSELETQV SQLRVENSTL MKRLTDVNQK YNEAAVDNRI LKADVETLRA 300 KVTHMRFMIV H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	243	250	RRSRRRKQ
2	245	250	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.3	1e-41	bZIP family protein