PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020681359.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 23420.8 Da PI: 6.9763 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.1 | 6e-20 | 71 | 120 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp + + +r++lg+f tae+Aa a+++a++k++g XP_020681359.1 71 HFRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFETAEDAAMAYDNAALKFKG 120 69*******.**********9...3.35************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MRGKEEEYEF NFPHYTPSRA EYDTSAMVSA LAHVIGGGGA GAGELAAGEA INSATDLPSE 60 AQGHEKEKKR HFRGVRQRPW GKWAAEIRDP NKAARVWLGT FETAEDAAMA YDNAALKFKG 120 KKAKLNFPEK VPNGNLFLNN RGVISQQNDQ SSITASDLVL YDSQASTISF ASSSQDYFTS 180 EVMLNFGDYS SGSSSGSSTS WPKKSYGDKR GKDIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07310.1 | 4e-20 | ERF family protein |