PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020680278.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | FAR1 | ||||||||
Protein Properties | Length: 222aa MW: 25754.1 Da PI: 8.5769 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 73.7 | 4.1e-23 | 44 | 130 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++++YA++ GFsvrk++++ ++++i++++fvCsk g++++++ + +++r +r+ +tgC a+++ ++dg w+v+++ + HnH+l XP_020680278.1 44 CFCTYAHDNGFSVRKDHHSFWPNSRKIKSKDFVCSKAGFKKNNDLN-SRKRFSRPDVQTGCPAMVRFVTDEDGYWHVKRFIESHNHDL 130 799*****************************************99.99*************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MVRSSRPISV LKTVDFWNVL WSDFWTELSG TIAVYKDETE AYECFCTYAH DNGFSVRKDH 60 HSFWPNSRKI KSKDFVCSKA GFKKNNDLNS RKRFSRPDVQ TGCPAMVRFV TDEDGYWHVK 120 RFIESHNHDL GSPAVRHLLR SCRNVVEEKA SVLKSMTDAG IRTVDAYAYL AEEVGGCENV 180 RFSKRDAYNF IQKEKRARIE IGDTNSLIQL FKDLQVEDRM FA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 5e-18 | FAR1 family protein |