PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020680224.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YB | ||||||||
Protein Properties | Length: 199aa MW: 21875.6 Da PI: 9.01 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 127.5 | 4.9e-40 | 57 | 141 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrflP+an+srimkk+lPan+ki+kdaket+q eas+kcqrekrktingddll a+atlGfe+y+eplk+yl+kyre+eg XP_020680224.1 57 VREQDRFLPVANISRIMKKALPANGKIAKDAKETTQ------------EASEKCQREKRKTINGDDLLSAMATLGFEEYIEPLKLYLQKYREMEG 139 69*******************************966............79********************************************* PP NF-YB 96 ek 97 ++ XP_020680224.1 140 DS 141 97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MLARVSEAAI WDVEVVVSDF FSFAGRRSRG GGSRFLAMAS PGDGSRENGE HSPRSNVREQ 60 DRFLPVANIS RIMKKALPAN GKIAKDAKET TQEASEKCQR EKRKTINGDD LLSAMATLGF 120 EEYIEPLKLY LQKYREMEGD SKLSTKVADN AGKREATGLQ VANQPGTSTQ VELKMPNHSS 180 FAHGMTYMQS QFHGGDLSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53340.1 | 9e-55 | NF-YB family protein |