PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020679260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | C2H2 | ||||||||
Protein Properties | Length: 369aa MW: 43450.7 Da PI: 9.7147 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.8 | 0.00017 | 22 | 45 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C++Cg + s ks+L++Hi + H XP_020679260.1 22 YYCEHCGICRSKKSLLRSHILSnH 45 89******************9988 PP | |||||||
2 | zf-C2H2 | 15.1 | 6.4e-05 | 69 | 91 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cg +F + +L +H+r+H XP_020679260.1 69 HACEECGARFWKPAHLAQHMRSH 91 67********************9 PP | |||||||
3 | zf-C2H2 | 18.4 | 5.9e-06 | 97 | 121 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dC s++rk++L+rH+ +H XP_020679260.1 97 FACPvkDCYFSYRRKDHLNRHLLKH 121 78*********************99 PP | |||||||
4 | zf-C2H2 | 13.4 | 0.00023 | 126 | 151 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + Cp C++sFs + n+krH ++ H XP_020679260.1 126 FDCPvqCCNRSFSFQGNMKRHGKKlH 151 679999***************99988 PP | |||||||
5 | zf-C2H2 | 15.7 | 4.2e-05 | 163 | 187 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk+F s Lk+H +H XP_020679260.1 163 HTCEkpGCGKTFEFASKLKKHKDSH 187 789999***************9988 PP | |||||||
6 | zf-C2H2 | 17.3 | 1.4e-05 | 254 | 278 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C ++Fs ksnL++H + H XP_020679260.1 254 KCSfqGCEQTFSKKSNLNKHVKAvH 278 799999**************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
METEAGKGND EQRLIFRDIR RYYCEHCGIC RSKKSLLRSH ILSNHKEELQ KEKLHEVSAF 60 KPASRKVQHA CEECGARFWK PAHLAQHMRS HSVERPFACP VKDCYFSYRR KDHLNRHLLK 120 HQGTVFDCPV QCCNRSFSFQ GNMKRHGKKL HGDDTPDEGK KRHTCEKPGC GKTFEFASKL 180 KKHKDSHLEV EFLEIFCGEP HCMKPFTNSE CLKAHIQSCH KYVKCEVCGA QQLRKNFKRH 240 QRTHEGVISK ERIKCSFQGC EQTFSKKSNL NKHVKAVHEK LRPFRCSTSG CQQRFSYKHV 300 RDNHEMTHVY MQGDFFEVDE QWRSRPRGGR KRERITIEAL TRKRVVPLDR TSIMENGAGY 360 LRWLFADDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-108 | C2H2 family protein |