PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020678932.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 262aa MW: 29686.4 Da PI: 9.7838 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.1 | 1.6e-32 | 180 | 238 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ XP_020678932.1 180 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHS 238 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MLPSTAEISL REGLVESHEV PMDQTSHIRF SFQSSSLPPL TCHPLGIIQN RLFASSTDVV 60 AEASSSSSPH LKETALLSSV PLRASEAAST LLRSTTNPCW SWSEETTRGP RATVDTHKNI 120 GSMSDKSIHE NLSNYTVNPK INRVGNNLSV GAMRMKKVKA RRKVREPRFC FKTMSEVDVL 180 DDGYKWRKYG QKVVKNTQHP RSYYRCTQDN CRVKKRVERL AEDPRMVITT YEGRHAHSPS 240 HDEDDQSQPS SMRSQLSTSF FW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39410.1 | 9e-53 | WRKY family protein |