PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020678873.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB_related | ||||||||
Protein Properties | Length: 361aa MW: 40311.4 Da PI: 8.7569 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.2 | 2.9e-11 | 82 | 136 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT.........-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.........tWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a +++ +Wk+I + +g +t q++s+ qky XP_020678873.1 82 RESWTEQEHDKFLEALQLYAFVlavsfrfdrDWKKIEAFVG-SKTVIQIRSHAQKY 136 789*****************99*******************.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MLYAIPAAEG GGSEFRGQAG FSADSFHRHH HQQQQQQQKG IPTGMVFQEV LGSITTSAAA 60 EETSSEDPNK KIRKPYTITK SRESWTEQEH DKFLEALQLY AFVLAVSFRF DRDWKKIEAF 120 VGSKTVIQIR SHAQKYFLKV QKNGTSEHVP PPRPKRKAAH PYPQKASKNG HQVPQPTTSF 180 QTSPCLPEPV YTLTSDRSSV IRNSTSGAIS SWVPIQPVEA LHTIKEDAGP TGSMLLNNSS 240 SSSSTENPQR IRQICETTDQ GHHVPSVRDF ARVYSFIGNI FDPSKRGHLQ KLMEMDPIDV 300 ETVLLLMRNL SINLTNPDFE DHRRLLSLYD ACAEEGKSSG TKGMLKAAEP INVPFLVKAE 360 Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.1 | 4e-80 | MYB_related family protein |