PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020678211.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 407aa MW: 43069.6 Da PI: 6.9744

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020678211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.4	2.4e-21	300	361	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN +L+ e++++kke ++l + XP_020678211.1 300 ERELKRQKRKQSNRESARRSRLRKQAECEELAHRVEVLKEENASLRAEVNRIKKEHEQLILQ 361 89*******************************************************99655 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MGNSEADTPS KAPKALAAQP SVTSTTPATP VYPDWSTFQA YSPIPPPGFF HSAVGSSPPP 60 HPYIWGAQHL MPPYGTPPPY VMYPHGGIYA HPPMAPGSLP FSPYAMASPN GNAEASGAFP 120 GSEAEGKSSE GKEKSPIKRS KGSLGSLNLI TGKNSELGKN SAASGNGAYS QSGDSGSEAS 180 SEGSDANSQN DSPQKTGDAQ NSSDAITHQN GNYAHGTTAH GLQNGTARGS AQSMVGQTMA 240 IVPMPTGTVT GPTTNLNIGM DFWGATNPST IPPIHGKVPA TAVATPMIPG ATSELWMQDE 300 RELKRQKRKQ SNRESARRSR LRKQAECEEL AHRVEVLKEE NASLRAEVNR IKKEHEQLIL 360 QNASLKERLG EIPKGTKELS HENPAEDYLE QNLDSDGKGR EADAGRK

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MGNSEADTPS KAPKALAAQP SVTSTTPATP VYPDWSTFQA YSPIPPPGFF HSAVGSSPPP  60
HPYIWGAQHL MPPYGTPPPY VMYPHGGIYA HPPMAPGSLP FSPYAMASPN GNAEASGAFP  120
GSEAEGKSSE GKEKSPIKRS KGSLGSLNLI TGKNSELGKN SAASGNGAYS QSGDSGSEAS  180
SEGSDANSQN DSPQKTGDAQ NSSDAITHQN GNYAHGTTAH GLQNGTARGS AQSMVGQTMA  240
IVPMPTGTVT GPTTNLNIGM DFWGATNPST IPPIHGKVPA TAVATPMIPG ATSELWMQDE  300
RELKRQKRKQ SNRESARRSR LRKQAECEEL AHRVEVLKEE NASLRAEVNR IKKEHEQLIL  360
QNASLKERLG EIPKGTKELS HENPAEDYLE QNLDSDGKGR EADAGRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	317	323	RRSRLRK
2	317	324	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-110	bZIP family protein