PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020678137.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 321aa    MW: 36377.2 Da    PI: 6.2601
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020678137.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH291.9e-09137184455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR+ri +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  XP_020678137.1 137 SHSLAERVRRERISERMKYLQGLVPGC----NKITGKAGMLDEIINYVQSLQ 184
                     8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MQEILQCLNP CSSASNLSVL ERQRARLQRQ QSFESMNEIN NLSFDNLISL PISPQNLQTD  60
QYFCSDSSLK NKKGGSLRKR KAPTVNSGEE EEKEKKMKPD DKPEKFKESG AEAETAAPPL  120
KRDFIHVRAR RGQATDSHSL AERVRRERIS ERMKYLQGLV PGCNKITGKA GMLDEIINYV  180
QSLQRQVEFL SMKLATVNPW IDFNIDSFLP KEVNLACNPS IPTVSVSTEL VEPNYFKMNP  240
MHQMATSCGL NIDVNFSDLV IRQSLSSPLT VHDTFLDPSF NVHSSSWDAN SQNICDLEFH  300
DQLPLQSLPD GYSPYNLKME M
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
178107RKRKAPTVNSGEEEEKEKKMKPDDKPEKFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.17e-54bHLH family protein