PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677613.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family G2-like
Protein Properties Length: 303aa    MW: 32930.1 Da    PI: 6.5654
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.71.7e-3091144155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_020677613.1  91 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 144
                     59*******************.********************************8 PP
2Myb_DNA-binding48.22.6e-1593143148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
   XP_020677613.1  93 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 143
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MREEEEPNWF ARWEEELPRP EELMPLSQSL ITSDLALAFD IPTQNPSPVP GLHHLGSTGN  60
QHSASPPLPA DLESPDHSAP VGEDSARTLK RPRLVWTPQL HKRFVDAVAH LGIKNAVPKT  120
IMQLMSVDGL TRENVASHLQ KYRLYLKRMQ GLSSSNAGPP VPMSAADAAT EQLFASNPIP  180
HPLLGRGASA LGQESFMQFM APPLLQHHQQ MVAAAAVQQQ YYHQRQMGHF GSLATGGGGY  240
DHGFHTRGAL PPQGLHRMAA SGLGMVRPSL PAASNSYDDD DDVDSRVGGG RRVLTLFPTC  300
GED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.11e-53G2-like family protein