PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677402.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 310aa    MW: 34760.4 Da    PI: 4.4528
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677402.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66.3e-102352751055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L+ l+P+      +K++ +++L +Av+Y+k Lq
  XP_020677402.1 235 RKRRERINERLRILQNLVPNG-----TKVDISTMLDEAVQYVKFLQ 275
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MESVGVVPEI YWNSFEEPVQ YDQETNTMAQ LLEGQIFGYD QVREQQSSSL MSMLWPYNEA  60
SPYCYLTDPN ANYEGINYHA MEDEQFASSF FQIDTAGNPF EGFISPNEVN SDESTDCNAA  120
NELELQNWRK SNQVEVPAER LQKKARVQKA TKNSRSKKKQ KGSRGGSDEE ESNAGINVQS  180
TSSYSSEEDY LNASQDITEG GSVSSSSKGS SALNLNGKVR AGRGAATDPQ SLYARKRRER  240
INERLRILQN LVPNGTKVDI STMLDEAVQY VKFLQLQIKL LSSDELWMYA PLAYNGMNLG  300
LDLMIPTNKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-43bHLH family protein