PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020676729.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 549aa MW: 58744.2 Da PI: 7.7061 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 106.5 | 1.3e-33 | 252 | 310 | 1 | 60 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers d++v+ei+Y+g+Hnh+k XP_020676729.1 252 VDDGYNWRKYGQKQVKGSEFPRSYYKCTHPKCPVKKKVERSL-DGHVTEIIYKGQHNHQK 310 59****************************************.***************85 PP | |||||||
2 | WRKY | 106.2 | 1.7e-33 | 430 | 488 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++dpk+v++tYeg+Hnh+ XP_020676729.1 430 LDDGYRWRKYGQKVVKGNPHPRSYYKCTNAGCNVRKHVERASTDPKAVITTYEGKHNHD 488 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence |
MAEGGGGGGG LAAPVEEGAK RPSISLPARF TVESLFRGGV SEASPGPMTL VSNFFAEDPE 60 SECRSFSQLL AGAMASPAAI TAPRKFLVEG EDTAAARTSV ETTIADERGR GVGGGGGGER 120 GGASLNLGHS RPMNLLVAQS PYFTVPAGLS PGGLLDSPAM FSNSAHFGMS HQQALAQVTA 180 QAAHSHTQIH SQAEYPSSLS SISLPQQVST TNITTAQPMQ SITSASYKFA SALIPHCDQK 240 AQPVALVVDK PVDDGYNWRK YGQKQVKGSE FPRSYYKCTH PKCPVKKKVE RSLDGHVTEI 300 IYKGQHNHQK PVPNKRSKEG AAELNGNSDP NNADCRPQGD LSNLNKSSEG MTSLCKRARE 360 SGHGASEQLT GSSDGEELGD AEAGIDEAEY SGESEQKKRN LETRVIESAS HRMVTEPRII 420 VQTTSEVDVL DDGYRWRKYG QKVVKGNPHP RSYYKCTNAG CNVRKHVERA STDPKAVITT 480 YEGKHNHDVP AARNSSHSTH ALAGPANRNN SAPHVVESNN QIINGISDLR NNVHRPIAVL 540 QLKGEHEMT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 1e-133 | WRKY family protein |