PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020676695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 268aa MW: 28819 Da PI: 5.4483 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.6 | 3.3e-11 | 147 | 194 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka++L + ++YI+ Lq XP_020676695.1 147 SHSLAERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYIQALQ 194 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 268 aa Download sequence |
MDPSSLISQS AMPEMWQFPM VGVSSAVRAT AAGLGHRDAS AGESTVTEQS VGNRSSKKRR 60 DSGPPAAAAN ALSEEDSSKF VSTSSGGIDL ADSEAKLLKT GKSIDENVES KVDAEATSGG 120 NKLDQPSEPP KQDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDLV PGCNKVIGKA 180 SVLDEIINYI QALQRQVEFL SMKLEAVDSR INTGLLEGFS SKDFGGQAYE NVSGLAYASQ 240 PSREYVQQGP ATEWLHMQVG GAFERVTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G59640.1 | 1e-77 | bHLH family protein |