PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020676489.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 315aa    MW: 34097.9 Da    PI: 6.2319
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020676489.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.62.7e-16212246135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C +  Tp+WR gp g+ktLCnaCG+++++ +l
  XP_020676489.2 212 CLHCAAERTPQWRTGPMGPKTLCNACGVRFKSGRL 246
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEGCCHAGTG QLVPEKQGKV VGDHCIVEEL LDFSNEAEGD TEMAAEEDGV SEETGGNCSA  60
DSCANSSSGG GGASHTRFAD ELVCRSLADV GLSGDLCEPY EELAELEWLS KFVEDSFSSD  120
EPHKQQLISG LKSTSSQPTH GTNSHFPTAN DAAHEPPPFT TDAPVPGKAR TKRARTAPCS  180
WSSRLLLVSL SSEKKKSPFP AALSPSPDGR KCLHCAAERT PQWRTGPMGP KTLCNACGVR  240
FKSGRLVPEY RPAASPTFVL SKHSNSHRKV LELRRQKETQ DQQPQQFLTV HNRAAAAGDE  300
FLIQHRLLED GRRVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.17e-60GATA family protein