PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020676478.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 359aa MW: 38074 Da PI: 7.7245

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020676478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	65.6	8.8e-21	241	303	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++elkrerrkq+NRe+ArrsR+RK++e++eL++kv eL ++N+aL+ ele+l k + l++e+ XP_020676478.1 241 DRELKRERRKQSNRESARRSRLRKQQECDELARKVSELNSQNSALRMELEQLHKVCRDLEAEN 303 689*******************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MGSPGETSTP AKPPNSTPFT AATTPPPAYT AEWAASLQAY YSGNAAAPTA FFPPVWGGQH 60 IMSPYATPIA YSPMYAPGAV YAHPSMTPGM GYPNADSGNI KSKGALLKFG EGGKAGSGSG 120 EEENSQRSSG GSATEGSSDT GNESADPQEN SKKRSSGDAF QEGEASHPAI ATPRKRAPKL 180 PVSAPGRTAL PGPATNLNIG MDIWNPPHTG PAPLKVRPNA TIASAAGANV LMVENQWAQD 240 DRELKRERRK QSNRESARRS RLRKQQECDE LARKVSELNS QNSALRMELE QLHKVCRDLE 300 AENQHIADEL SSIREESSST LKQGVGDHID TIPLSSTTTS TKMNGKLYHP GGNPDPSSR

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MGSPGETSTP AKPPNSTPFT AATTPPPAYT AEWAASLQAY YSGNAAAPTA FFPPVWGGQH  60
IMSPYATPIA YSPMYAPGAV YAHPSMTPGM GYPNADSGNI KSKGALLKFG EGGKAGSGSG  120
EEENSQRSSG GSATEGSSDT GNESADPQEN SKKRSSGDAF QEGEASHPAI ATPRKRAPKL  180
PVSAPGRTAL PGPATNLNIG MDIWNPPHTG PAPLKVRPNA TIASAAGANV LMVENQWAQD  240
DRELKRERRK QSNRESARRS RLRKQQECDE LARKVSELNS QNSALRMELE QLHKVCRDLE  300
AENQHIADEL SSIREESSST LKQGVGDHID TIPLSSTTTS TKMNGKLYHP GGNPDPSSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	258	264	RRSRLRK
2	258	265	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.2	2e-45	bZIP family protein