PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020675952.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 108aa    MW: 12205.2 Da    PI: 10.3063
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020675952.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.71.6e-181447134
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                    Cs+C   kTp+WR gp g+ktLCnaCG++y++ +
  XP_020675952.2 14 CSHCDIQKTPQWRAGPMGPKTLCNACGVRYKSGR 47
                    *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MKRDLDSVPS MRKCSHCDIQ KTPQWRAGPM GPKTLCNACG VRYKSGRLFP EYRPAASPTF  60
VPAVHSNSHK KVVEMRLRCT EMVGKSGGRE IPVAAKNCDL LEYIRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.22e-40GATA family protein