PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020675056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | C2H2 | ||||||||
Protein Properties | Length: 354aa MW: 38463.7 Da PI: 8.1883 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 22.2 | 3.7e-07 | 158 | 179 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_020675056.1 158 FCEICGKGFRRDANLRMHMRAH 179 6*******************99 PP | |||||||
2 | zf-C2H2 | 13.4 | 0.00023 | 247 | 270 | 1 | 23 |
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C C+ ksFs +Lk+H +++ XP_020675056.1 247 YTCDVCNkKSFSVVADLKNHKKSC 270 9********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence |
MIGSTGSRNV GGSAASENEP PNFQSSSVTI TTPMASDPRI PLLNLSLLGQ KMDCLRRSLS 60 DSVDRHVSIS GDQLQLFSGE IASAVHQVII NGSALLLAST QLLDATKPLH PLSNIDAKPS 120 VNSGQVPPRP LPEAVVADAD AEIVEIDASE LMAEHVHFCE ICGKGFRRDA NLRMHMRAHG 180 DRFKTLESLT KPYGRIATEG IDTGRHVRFS CPFLSCRRNR NHARFRPLKT TVCVRNHFRR 240 SHCPKMYTCD VCNKKSFSVV ADLKNHKKSC GESQWRCSCG TSFSRKDKLF GHVALFDGHF 300 PVVGTGEEER GDGAVKAGEI KDKRGGQAGG SLDEGFFDGL MEEIGGMGGG WMGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34370.3 | 4e-69 | C2H2 family protein |