PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020674728.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YB | ||||||||
Protein Properties | Length: 223aa MW: 24618.3 Da PI: 6.455 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 172.3 | 5.2e-54 | 27 | 123 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrf+Pianv+rim+kvlP++akis+daket+qecvse+isf+tsea+++cqre+rkti+++d+lwa+++lGf+dyvepl+v+l++yre eg XP_020674728.1 27 VREQDRFMPIANVIRIMRKVLPTHAKISDDAKETIQECVSEYISFITSEANERCQREQRKTITAEDVLWAMSKLGFDDYVEPLSVHLQRYREHEG 121 69********************************************************************************************9 PP NF-YB 96 ek 97 ++ XP_020674728.1 122 DH 123 96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MNPCINNHIG GGVGGGGSGG AGNQCTVREQ DRFMPIANVI RIMRKVLPTH AKISDDAKET 60 IQECVSEYIS FITSEANERC QREQRKTITA EDVLWAMSKL GFDDYVEPLS VHLQRYREHE 120 GDHRGSIRGE PIQLKRAAAE GGVDNSPAVG VYGLPQLQAA YHFPATEPHH HHHHQHQHHH 180 FGVYGGAATG GEMGGYYMGV YGDPETGSSQ ELVDNFDLYA HYK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 1e-62 | NF-YB family protein |