PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020674407.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 152aa MW: 17380.1 Da PI: 9.9652 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.1 | 1.8e-09 | 2 | 41 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 RRdr+N++f eL ++l + + +K++K++iL+ A++ +++L XP_020674407.1 2 RRDRLNDKFLELGSILEPG---KPPKVDKVSILKDATRMVNQL 41 ******************9...99***************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MRRDRLNDKF LELGSILEPG KPPKVDKVSI LKDATRMVNQ LRGEAQKLKD LNESLQEKIK 60 ELKVEKNELR DEKQRLKAEK ESLEQQIKFL NARPSFIPHA PVIPTAFAAQ GNKPGQKLMM 120 PIISYPGYPM WQFMQPSDVD TSQDAESRPP VA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 3e-75 | bHLH family protein |