PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019200547.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26939.5 Da PI: 8.3152 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.4e-20 | 89 | 139 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + k +r++lg+f+ta +Aaka+++a+ kl+g XP_019200547.1 89 HYRGVRQRP-WGKFAAEIRDP---NrKGTRVWLGTFDTAVDAAKAYDRAAFKLRG 139 7********.**********9...6566*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MALSGENCTL EQIRHLLLDD PAFNQLYCNS EQNCFNPQVV ASSPSSKFNE RKPSLNIAIP 60 RPAAVNNKGA GQMPPPPEIQ DSGEVVKRHY RGVRQRPWGK FAAEIRDPNR KGTRVWLGTF 120 DTAVDAAKAY DRAAFKLRGS KAILNFPLEV ENFRPESQPQ PPPTFGQKRP REAEEEVAVI 180 KQVKREVVEE SSEAPQPPPA AAAAAAPLTP SSWMTVWDCS EAKGIFEIPP LSPNVYNYHG 240 IRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 5e-42 | ERF family protein |