PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019200545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 254aa MW: 28828.5 Da PI: 7.9935 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.5 | 6.7e-18 | 167 | 217 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ r++lg+++t +Aa+a++ a+ k++g XP_019200545.1 167 RYRGVRRRP-WGKFAAEIRDPTRK--GSRIWLGTYDTDIDAARAYDCAAFKMRG 217 7********.**********8542..4*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MYLYSIYMSY PYPASLKISI PIFFFFYIYT AGMEDRQMND TCMMTTTDEF MTLELISQYL 60 LGDFASTEAF IGNLGFCFPD DDFNDYRPFS GSDKPESSTS VSDSVSPVPD LKRPESPVSR 120 YLNLELDFPE FETKPDIIVR STPDSSSTTQ NSAGANKESG NGGKGRRYRG VRRRPWGKFA 180 AEIRDPTRKG SRIWLGTYDT DIDAARAYDC AAFKMRGRKA ILNFPLDAGK SGPPVNHGRN 240 RRKEIKSRVK EEIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 7e-33 | ERF family protein |