PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019200470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 605aa MW: 66907.7 Da PI: 4.7636 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 171.1 | 3.5e-53 | 21 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtdeel+++yLk k++g+k e+ +vi+e+di+k+ePwdLp +++++ ++ew+fF++ d+ky++g+r nrat++gyWkatgkd+++l XP_019200470.1 21 LPVGFRFHPTDEELINHYLKLKINGSKAEV-SVIREIDICKLEPWDLPdlSMIESYDNEWFFFCPIDRKYQNGQRMNRATERGYWKATGKDRNIL 114 79*************************999.99**************96448888999************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ ++g+kktLv+ykgrap+g++++Wv+heyr+ XP_019200470.1 115 TRNRVKIGMKKTLVYYKGRAPDGKRSNWVIHEYRA 149 *********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 605 aa Download sequence |
MAVLPLERST TTTVLPPLSS LPVGFRFHPT DEELINHYLK LKINGSKAEV SVIREIDICK 60 LEPWDLPDLS MIESYDNEWF FFCPIDRKYQ NGQRMNRATE RGYWKATGKD RNILTRNRVK 120 IGMKKTLVYY KGRAPDGKRS NWVIHEYRAT DKALDGTQPG QTPYVLCRLF KKNELKQDEN 180 AESPNSNGVE PNVSSPAVVK SPGEDDQSET VTPMGSYHIK AQPLTPEKSS VEESPIAQLP 240 VDSNSISSNA NNAEEDLDIL HDPDLEEALT YLYEPSEEDF NIFSLPQTEM QGLGSSYAYN 300 AVTTNCGDDM YIQSLSETNI SDENEFMNSF LVSSDEIPYG DSVQQILSIE HATPNYVSTI 360 NKPSEAEMMQ GLVNTGFFEN VPANALLQRH VDHVPNPSGG VYTPHTFNGG PEKWNSDPLK 420 NNYPGQDVFS TMCDGSQAVN MVNLGGEGGS VNAVSSFGTG IRLRTRQARS QTADQPFTMQ 480 GTAPRRIRLQ MSFPAASVQS RLPEDSNQAE SEKSALTEGE TIDSTATSSL ETRDIIARAF 540 KRDGEISKNT STKTKDKEGF AACSNGNTIS VFSKTGLLHS VYMPKVLIAV SLLLVLVGSL 600 AYIRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24590.2 | 6e-76 | NAC family protein |