PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019200440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 298aa MW: 34482 Da PI: 7.0971 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.9 | 7e-52 | 19 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeelvv+yL++k++++++++ +i+e+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk+v + XP_019200440.1 19 MPPGFRFHPTDEELVVHYLCRKCASQSISV-PIIAEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPVGK- 111 79****************************.88***************6666689*************************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ g+kk Lvfy g+apkg+kt+W+mheyrl XP_019200440.1 112 -PRTLGIKKALVFYAGKAPKGVKTNWIMHEYRL 143 .7789**************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 298 aa Download sequence |
MKNNGGILNN NEQQQQLEMP PGFRFHPTDE ELVVHYLCRK CASQSISVPI IAEIDLYKFD 60 PWQLPDMALY GEKEWYFFSP RDRKYPNGSR PNRSAGTGYW KATGADKPVG KPRTLGIKKA 120 LVFYAGKAPK GVKTNWIMHE YRLANVDRSA GKKNNLRLDD WVLCRIYNKK GSVEKYYNVD 180 QNDVVLPKLE DQKPNITQFS QSATMLTQAA LPPVVQNQHD YVHFDTSESV LRWHTDSSCC 240 SEQVLSSPEF AADKEVQSAP KWDDLNFQLN NFIDDPFQMP QYNDPFQQDM FMYMQKPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-123 | NAC family protein |