PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019199925.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 485aa MW: 52592.4 Da PI: 5.1725

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019199925.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.7	1.4e-39	145	205	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_019199925.1 145 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKNKNSA 205 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MREVKDSEIK LFGKKIALPE YGRVVLAAAG EYAESCENDC GSERDRCSDD SKLNGSSGKG 60 GADVDEFDTQ KREDDDKELL SDEFSEEKDQ DQDMDELEST KNESESDNSV KTPPVDEDSP 120 SPKLSKTESD QTETNNSEQK TLKKPDKILP CPRCNSMDTK FCYYNNYNVN QPRHFCKSCQ 180 RYWTAGGTMR NVPVGAGRRK NKNSASHCRH ITITEALQAA TYKPNGTVLS FGPESPLCES 240 MASLLNLADK KVPNGMRNGF YKHEQGNSSN KVGENGDDCS SVSSVTTTSS VAGGKIPSQE 300 AVMPNINGFP SPVPYLPGVP WPFPWNAAVP LPAICPPGFP MPFCPAPYWN CAVPGPWSLP 360 WLAPPSPTAN QKASSSAPNS PLGKHSREGE LLSPKNPEAK ESSEQKSSGN SVLVPKTLRI 420 DDPDEAAKSS IWSTLGIKYD SISRGGLFKA LQPKSDEKSH TATPPSALQA NPAALSRSLS 480 FQESA

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MREVKDSEIK LFGKKIALPE YGRVVLAAAG EYAESCENDC GSERDRCSDD SKLNGSSGKG  60
GADVDEFDTQ KREDDDKELL SDEFSEEKDQ DQDMDELEST KNESESDNSV KTPPVDEDSP  120
SPKLSKTESD QTETNNSEQK TLKKPDKILP CPRCNSMDTK FCYYNNYNVN QPRHFCKSCQ  180
RYWTAGGTMR NVPVGAGRRK NKNSASHCRH ITITEALQAA TYKPNGTVLS FGPESPLCES  240
MASLLNLADK KVPNGMRNGF YKHEQGNSSN KVGENGDDCS SVSSVTTTSS VAGGKIPSQE  300
AVMPNINGFP SPVPYLPGVP WPFPWNAAVP LPAICPPGFP MPFCPAPYWN CAVPGPWSLP  360
WLAPPSPTAN QKASSSAPNS PLGKHSREGE LLSPKNPEAK ESSEQKSSGN SVLVPKTLRI  420
DDPDEAAKSS IWSTLGIKYD SISRGGLFKA LQPKSDEKSH TATPPSALQA NPAALSRSLS  480
FQESA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-87	Dof family protein