PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019199828.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 244aa MW: 27565.1 Da PI: 9.7038

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019199828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.9	1.2e-50	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+++d++k++PwdLp e+e yfFs+r+ ky++g+r++rat sgyWkatg dk++ s XP_019199828.1 14 LPPGFRFHPTDEELVVQYLKRKVFSCPLPA-SIIPDFDVCKSDPWDLPGD---WEQERYFFSTREVKYPNGNRSSRATGSGYWKATGIDKQIASC 104 79**************************.89***********44...46799******************************997 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+kktLvfykg+ap+g++tdW+mheyrl XP_019199828.1 105 rGRQLVGMKKTLVFYKGKAPHGSRTDWIMHEYRL 138 57778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MEKMSFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVFSCP LPASIIPDFD VCKSDPWDLP 60 GDWEQERYFF STREVKYPNG NRSSRATGSG YWKATGIDKQ IASCRGRQLV GMKKTLVFYK 120 GKAPHGSRTD WIMHEYRLAN APTSLQPPNN NNENWVLCRI FLKKRTAKKE DETTEMNRGA 180 SLGNGTKPVF YDFLARERAD LNLAPASSSS GSSGVTVLSS NHQTSDDHEE SSSCSSFTTL 240 RRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-100	NAC family protein