PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019199607.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 204aa MW: 22694.9 Da PI: 4.9069 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.7 | 4.2e-16 | 2 | 43 | 5 | 48 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T++E+ l+++ + ++G++ W++Iar+++ gRt++++k++w++++ XP_019199607.1 2 TPQEERLILEFHSKWGNK-WSRIARKLP-GRTDNEIKNYWRTHM 43 9*****************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 204 aa Download sequence |
MTPQEERLIL EFHSKWGNKW SRIARKLPGR TDNEIKNYWR THMRKKAQEK KKNNNNGGAC 60 ISASSSSLTN CCSYSSSANS PPAVESVVDE ANERDFYDTG GVDEELPPTH DNGAAAAAKA 120 YTMDEIWKDI EQLGDVYCGN QPRSVTSSSS PMWNYWAETL LMTADYNHGG GGESKIVPFP 180 PPPPPTNDQF YSSFDNQDSI FLTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G46130.2 | 1e-29 | MYB_related family protein |