PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019199474.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | YABBY | ||||||||
Protein Properties | Length: 157aa MW: 17564.7 Da PI: 8.8901 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 181.7 | 4.2e-56 | 1 | 131 | 31 | 170 |
YABBY 31 lfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrv 125 +f++vtvrCGhC++llsvn+ q l+ +++ +++e+k++++n + +++s+s+ ++ +++ e+e+ pr p irPPekrqrv XP_019199474.1 1 MFTIVTVRCGHCANLLSVNMGSLLQPLPLHQD--------IQNEQKQQQSNNEDGSGSSSSSSKCNKFAPFDSPEHEQQPRLAP-IRPPEKRQRV 86 699*****************999999998886........666666666666666666777777777778899999999*9999.9********* PP YABBY 126 PsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 PsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_019199474.1 87 PSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 131 *******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MFTIVTVRCG HCANLLSVNM GSLLQPLPLH QDIQNEQKQQ QSNNEDGSGS SSSSSKCNKF 60 APFDSPEHEQ QPRLAPIRPP EKRQRVPSAY NRFIKEEIQR IKASNPDISH REAFSTAAKN 120 WAHFPHIHFG LNLDNNKQAK IDHAVGGEGP QKSLGLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 1e-53 | YABBY family protein |