PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019199019.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 325aa MW: 34718.4 Da PI: 9.1294

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019199019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122	2.1e-38	69	129	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ lkcprCdst tkfCyynnyslsqPr+fCk+CrryWt+GGa+rnvPvGgg+r+nk+s+ XP_019199019.1 69 PENGLKCPRCDSTSTKFCYYNNYSLSQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRNKRSK 129 67899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MVFSSFPVYL DHSNLHQLQQ AAAGYHQQTG LENHQISTLP APAPVGAGQS SIRPGSMVDR 60 ARIARMPQPE NGLKCPRCDS TSTKFCYYNN YSLSQPRHFC KTCRRYWTRG GAMRNVPVGG 120 GCRRNKRSKN NGSKGAAAAV SEKQSGGGNT NTNTNTSTHM NISCPPTSCG SAEISGSFSQ 180 QLPLMAAFQA GLNHFGGGFQ PPPQLVGNEN GGFGEMSFLS TGGAEPWRLP ASLTAFDTTP 240 PTNLFPNFQN EAAIEAASSS RATSEFPHQL TSSVKMEDTH GLNSNSTKQF LGNNQFWGGG 300 ADTWTGRFSG HLNSSSTSSS TTHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	1e-46	Dof family protein