PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019198756.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 307aa    MW: 34317 Da    PI: 4.7289
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019198756.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.6e-20111160255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdps+     r++lg+f+taeeAa+a++  +++++g
  XP_019198756.1 111 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFDTAEEAARAYDTEARRIRG 160
                     69*******.**********965...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MCGGAIISDI KPPARTSRRL TSELLWGIAD RSSAGGKKKK NFAGSYYSGG LRSSAFDLDN  60
EFEADFQDFN DYDDDEVVEV DVKPFAFGLS SGFSSDSKDF DQTMKRKRKN QYRGIRQRPW  120
GKWAAEIRDP SKGVRVWLGT FDTAEEAARA YDTEARRIRG NKAKLNFPAD AETQTKSSRR  180
AVKVNPRKAV SKTVQKPPVN SLDCTDYGWG EQTPEISSAL SAAVEAADEI QFIQETNPQK  240
KLKSTENTVE KLSEELSAFE DEMKFLQIPY LEGNWDSSVD TYLNADGGNA IDLWSFDDVP  300
SLMGDVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.33e-55ERF family protein