PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019198523.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 112aa MW: 12346.9 Da PI: 5.7751 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 136.3 | 9.1e-43 | 20 | 111 | 1 | 92 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 vre++r lP+anvsrimkk+lP nakis +ak+ vqec++efisf+t+eas++ q ekrkt++gdd+l +l tlGfedy epl++yl+ky+e XP_019198523.1 20 VREHERSLPVANVSRIMKKALPPNAKISLEAKDFVQECATEFISFITNEASERGQIEKRKTLTGDDVLNSLDTLGFEDYGEPLRAYLMKYKE 111 5899**************************************************************************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 112 aa Download sequence |
MEGAPGGGGS HQSSQSKLAV REHERSLPVA NVSRIMKKAL PPNAKISLEA KDFVQECATE 60 FISFITNEAS ERGQIEKRKT LTGDDVLNSL DTLGFEDYGE PLRAYLMKYK ES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G38880.6 | 1e-43 | NF-YB family protein |