PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019198516.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 428aa MW: 47179.5 Da PI: 4.8863

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019198516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.2	4.3e-34	220	274	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_019198516.1 220 KPRMRWTPELHEVFVEAVNKLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRT 274 79****************************************************8 PP
2	Myb_DNA-binding	56.6	6e-18	222	273	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_019198516.1 222 RMRWTPELHEVFVEAVNKLGGSeraTPKGVLKLMNvEGLTIYHVKSHLQKYR 273 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MNARPAFFIQ RSSEAQHSNM GVSGAMSTPL PILPSIEEKF SKLPGPTSSS SGSQKDLHVS 60 PQENKSRNYP FISNSSIDGP SLASSHSGIQ SSGLDSFPVC NGIDSWSKEE CRDFVDYTTS 120 IPAQNGQVET LAGVMSSDDH ARRTDWQEWA DQLINDDDTL AGTSWNDILI DVDVPDPEPK 180 LLLPSPDVPV LQPQTLQQTP TLSEQNFAVA SPSSAAALTK PRMRWTPELH EVFVEAVNKL 240 GGSERATPKG VLKLMNVEGL TIYHVKSHLQ KYRTARYKPE PPSEETSETK PASVPEAASL 300 DMKTTMGITE ALRLQMEVQK QLHEQLEIQR KLQLRIEEQG KYLQMMFEKT RNMGKELKAS 360 SPASDEPPPL SPPNDNQELP DRDNNANSEL GSSNKRPEPS SQERNSAGKD FDSPPRKHAK 420 VDDTTAPQ

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MNARPAFFIQ RSSEAQHSNM GVSGAMSTPL PILPSIEEKF SKLPGPTSSS SGSQKDLHVS  60
PQENKSRNYP FISNSSIDGP SLASSHSGIQ SSGLDSFPVC NGIDSWSKEE CRDFVDYTTS  120
IPAQNGQVET LAGVMSSDDH ARRTDWQEWA DQLINDDDTL AGTSWNDILI DVDVPDPEPK  180
LLLPSPDVPV LQPQTLQQTP TLSEQNFAVA SPSSAAALTK PRMRWTPELH EVFVEAVNKL  240
GGSERATPKG VLKLMNVEGL TIYHVKSHLQ KYRTARYKPE PPSEETSETK PASVPEAASL  300
DMKTTMGITE ALRLQMEVQK QLHEQLEIQR KLQLRIEEQG KYLQMMFEKT RNMGKELKAS  360
SPASDEPPPL SPPNDNQELP DRDNNANSEL GSSNKRPEPS SQERNSAGKD FDSPPRKHAK  420
VDDTTAPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	4e-79	G2-like family protein