PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019197856.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 437aa MW: 50493.2 Da PI: 6.1565

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019197856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.3	3.3e-45	37	167	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppG+ F+Ptd+el+ eyL kkv++ +l+ + i++v++y+++P++L +k+k +kewyfF++r++ky++g+r+nra+ +gyWkatg dk++ XP_019197856.1 37 LPPGYIFNPTDQELILEYLYKKVNNLRLPR-NKINDVNLYEYNPETLCqAKFKDscVNKEWYFFTPRNRKYRNGQRPNRAAGNGYWKATGADKDI 130 79************************99.77**********634444433567********************************** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 l++ ++++vg++k Lvfy+ + p+g kt W+mheyr+ XP_019197856.1 131 LESeTNNKVGCRKALVFYESKPPNGDKTPWIMHEYRV 167 9867788**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MAIEPISSVS GDVEQYSIDN IELFLGQISD EVFFRHLPPG YIFNPTDQEL ILEYLYKKVN 60 NLRLPRNKIN DVNLYEYNPE TLCQAKFKDS CVNKEWYFFT PRNRKYRNGQ RPNRAAGNGY 120 WKATGADKDI LESETNNKVG CRKALVFYES KPPNGDKTPW IMHEYRVENG PQCDRSLDEM 180 RLDDWVLCRI YNKNDKLNSK NNNPSSKGKQ KLEEDEDKDK DVVENDDDVP ENVCGGGSNT 240 SHQNHLEMAA LSSSYHHHIA PPDAIATAPP YHSPSHIMWN QLLPPPQTTN IIHHNQKQQQ 300 EDNNVFHHHN NNFIENYCHI ENTTSYYFSS CTSTSAQPSI NAANNLHCLP YHHQYHNWQA 360 QALHPSFNGN HHSYYQHHNS ELMEALPHPT INGNNTNNHH HHNYSQAPQP TTTQAQAQTA 420 AHYDDEEEEY DTNQFLA

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MAIEPISSVS GDVEQYSIDN IELFLGQISD EVFFRHLPPG YIFNPTDQEL ILEYLYKKVN  60
NLRLPRNKIN DVNLYEYNPE TLCQAKFKDS CVNKEWYFFT PRNRKYRNGQ RPNRAAGNGY  120
WKATGADKDI LESETNNKVG CRKALVFYES KPPNGDKTPW IMHEYRVENG PQCDRSLDEM  180
RLDDWVLCRI YNKNDKLNSK NNNPSSKGKQ KLEEDEDKDK DVVENDDDVP ENVCGGGSNT  240
SHQNHLEMAA LSSSYHHHIA PPDAIATAPP YHSPSHIMWN QLLPPPQTTN IIHHNQKQQQ  300
EDNNVFHHHN NNFIENYCHI ENTTSYYFSS CTSTSAQPSI NAANNLHCLP YHHQYHNWQA  360
QALHPSFNGN HHSYYQHHNS ELMEALPHPT INGNNTNNHH HHNYSQAPQP TTTQAQAQTA  420
AHYDDEEEEY DTNQFLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	3e-52	NAC family protein