PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019197806.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 389aa MW: 43679.1 Da PI: 7.1884 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 160.3 | 7.5e-50 | 29 | 156 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 + pGfrF+Ptdeel+++yLkkk+eg++ + evi+ev+i ++ePwdLp k+v ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+ XP_019197806.1 29 MFPGFRFSPTDEELISYYLKKKLEGSDRCV-EVISEVEIWRHEPWDLPavKSVIQSDNEWFFFSPRGRKYPNGSQSRRATESGYWKATGKERNVK 122 579************************777.99***************5335556899************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++++g+k+tLvf++grapkg++t+W+mhey + XP_019197806.1 123 S-GSNVIGTKRTLVFHTGRAPKGQRTQWIMHEYCM 156 *.99*****************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 389 aa Download sequence |
MDDGHASSSR NINNNNSTTE IPLATASAMF PGFRFSPTDE ELISYYLKKK LEGSDRCVEV 60 ISEVEIWRHE PWDLPAVKSV IQSDNEWFFF SPRGRKYPNG SQSRRATESG YWKATGKERN 120 VKSGSNVIGT KRTLVFHTGR APKGQRTQWI MHEYCMNGTR SQPQDSMVVC RLRKNNEFHL 180 NEAPRNQMND SNANNCMTAL SGADPAGSSG GVNAGESCSK ECSSSFNSHS VEQIDSGSDS 240 DEKLVNEISL HHPPGHQKDF FDAEDWFADI MKDDIVKLDD SSLNPRLDAL PATTTKPEPE 300 PQQNQATMAA QGFTPDLFPF QGTANRRLRL RKEAVGFSEA ARGEVLPRCL VSMMSRGRMK 360 RCSIYVCFLS LIILLFCCSA LIYFFIWRI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 326 | 332 | RRLRLRK |
2 | 326 | 333 | RRLRLRKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22290.1 | 2e-81 | NAC family protein |