PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019197805.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

E2F/DP

Protein Properties

Length: 443aa MW: 49461.9 Da PI: 4.4198

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019197805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	87.4	1e-27	125	190	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_019197805.1 125 RYDSSLGLLTKKFINLIKHAEDGIIDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 190 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MQQQQQEALK RQQLPFAAVQ PPFGDYHRFS ADPRHRASQE AEGIVVKTPP LKRKNETMNH 60 NQVSGDENPG FVYSLNSPLQ TPVSGKAGKT QKMPRTSKAN RSASQSAANV GSPSGNNTTP 120 VGPCRYDSSL GLLTKKFINL IKHAEDGIID LNNAADTLEV QKRRIYDITN VLEGIGLIEK 180 KLKNRIQWKG LDVSRTGEPD ESVLSLQTEV ESLTLEERRI DEQIREMQER LRDLSEDENN 240 QRWLFVTEDD IKNLPCFQNE TLIAIKAPHG TTLEVPDPDE AVDYPQRRYR IVLRSTMGPI 300 DVYLVSQFEE KFEDINAFEA PPNIPSTPGA NENATTTIEI ESRENEVGVQ ENETERMSSD 360 VGTSQDFVSG IMKIVPDVDN EADYWLLSDA PDVSITDMWT ESEIDWNGLG TLPEDYTMAT 420 VNTPPAQPPP PTKPPSTANT SNS

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MQQQQQEALK RQQLPFAAVQ PPFGDYHRFS ADPRHRASQE AEGIVVKTPP LKRKNETMNH  60
NQVSGDENPG FVYSLNSPLQ TPVSGKAGKT QKMPRTSKAN RSASQSAANV GSPSGNNTTP  120
VGPCRYDSSL GLLTKKFINL IKHAEDGIID LNNAADTLEV QKRRIYDITN VLEGIGLIEK  180
KLKNRIQWKG LDVSRTGEPD ESVLSLQTEV ESLTLEERRI DEQIREMQER LRDLSEDENN  240
QRWLFVTEDD IKNLPCFQNE TLIAIKAPHG TTLEVPDPDE AVDYPQRRYR IVLRSTMGPI  300
DVYLVSQFEE KFEDINAFEA PPNIPSTPGA NENATTTIEI ESRENEVGVQ ENETERMSSD  360
VGTSQDFVSG IMKIVPDVDN EADYWLLSDA PDVSITDMWT ESEIDWNGLG TLPEDYTMAT  420
VNTPPAQPPP PTKPPSTANT SNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-155	E2F/DP family protein