PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019197791.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 868aa MW: 98411.6 Da PI: 6.9756 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 43.6 | 9.8e-14 | 56 | 129 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY+eY+k++GF++r+s+ + k + + t r+f C + g ++++ ++ C a+l+++++ ++kw+vtk+ +H+H++ XP_019197791.1 56 FYDEYGKRMGFRTRVSHFGRLKADVSSTFRDFLCARDGLKKRTGET--------------CGAMLRIELKGKNKWVVTKFLRDHSHSI 129 9**************************************9998777..............**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 868 aa Download sequence |
MDVEVIDVEE GNMGQHGGVT DDGDDELSES STQDVNRAVE PHLGMEFHSE DAAKTFYDEY 60 GKRMGFRTRV SHFGRLKADV SSTFRDFLCA RDGLKKRTGE TCGAMLRIEL KGKNKWVVTK 120 FLRDHSHSIE SPNNVHYLRA HRHTAMTTKV ATENSLAAGL VPSGVMYVSV DGSHAPIEMN 180 HGVKNCRTAD SDRLTKNSTT LMYAPKQYNQ RRTLGRDAHG LLDYFKKMQA ENPGFYYAIQ 240 LDEDNRMANV FWADSRSRNA YSHFGDAVTL DTTYRVKHCK VPFAPFTGVN HHGQLILFGC 300 ALLLDESEAT FVWLFKTFLA AMNNHAPISL TTDQDRAIQS AVAQVFPETC HCINKWDVLR 360 QGQERMAPVC IMHPNFQVEL YNCINMTETV EEFELCWDSI LRKYDLQKND WLHSIYNVRQ 420 RWAPVYFRAS FFAAIASNQG SESSFFDGYV NQQTTLPIFI RQYEAALENS FEKEIESDFE 480 TICTTPVLRT PSPMEKQAAN LYTRWIFSKF QVELVETFVY TANMIDGDGT VSMYRVAKFE 540 DDSKAYIVSL NCSEMKAKCS CQMFEYSGIL CRHILTVFTV TNVLTLPSHY ILKRWTRNAK 600 SVVGSDECGE RHSNESMLAR YNSLCREAIR YAEEGALAPE TYNVALSALK EAKKKVSAAK 660 KNVARVIPPN SQVSGVYDDR RSSGSAPDMN PILWPCQDEM MKHFNLNVCV PTKPVTDLNI 720 PRMAPVSVHR DDGHTDNMVS LPCLKSMTWV MENKSSTPAN RVAVINLKLQ DYSRSTPQES 780 EVKFQLSKIT LEPMLKSMAY ISEQLSTANR VAVINLKDTE TTSGESEVKF QVSRDTLGAM 840 LRSMAYIREQ LSNTVEPQVE TPSKKQRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27110.2 | 0.0 | FAR1 family protein |